Entering edit mode

9 months ago

Laven9
•
0

I am trying to use "QuSAGE" for enrichment analysis. Thus my seurat object needs to be transformed into ExpressingSet, and I use "SeuratToExpressionSet". But it went wrong when running "SeuratToExpressionSet":

```
Calculating gene-by-gene comparisons...Error in calcIndividualExpressions(eset.2, eset.1, paired = paired, min.variance.factor = min.variance.factor) :
Input Matrices need to be matrices...
```

What does the difference of "Matrices" and "matrices"?

What is the output of

`class(exprs(YourExpressionSet))`

?it shows [1] "matrix" And I am trying another package named "VisCello"